Name: | bionetgen |
---|---|
Version: | 2.5.0 |
Release: | 5.el7 |
Architecture: | aarch64 |
Group: | Unspecified |
Size: | 584508 |
License: | GPLv3 |
RPM: | bionetgen-2.5.0-5.el7.aarch64.rpm |
Source RPM: | bionetgen-2.5.0-5.el7.src.rpm |
Build Date: | Sun Sep 15 2019 |
Build Host: | ca-buildarm02.us.oracle.com |
Vendor: | Oracle America |
URL: | https://github.com/RuleWorld/bionetgen |
Summary: | Software for rule-based modeling of biochemical systems |
Description: | BioNetGen is software for the specification and simulation of rule-based models of biochemical systems, including signal transduction, metabolic, and genetic regulatory networks. The BioNetGen language has recently been extended to include explicit representation of compartments. A review of methods for rule-based modeling is available in Science Signaling (Sci. STKE, 18 July 2006, Issue 344, p. re6). BioNetGen is presently a mixture of Perl and C++. Network generation is currently implemented in Perl, the network simulator is C++, and a new language parser is being developed with ANTLR. |
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
- Use devtoolset-8 on EPEL 7
- Rebuild for sundials
- Perl 5.30 rebuild
- Release 2.5.0
- Ready for MPI (disabled) - Bundle Sundials
- Rebuild for openmpi 3.1.3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
- Filtering of SBMLMultiAux module
- Release 2.4.0 - Drop obsolete patch - Rebuild on epel7 (rhbz#1647989)